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The use of spa and phage typing for characterization of clinical isolates of methicillin-resistant Staphylococcus aureus in the University Clinical Center in Gdańsk, Poland

机译:波兰格但斯克大学临床中心使用spa和噬菌体分型鉴定耐甲氧西林金黄色葡萄球菌的临床分离株

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摘要

The emergence of spa types and spa–clonal complexes (CC) among clinical methicillin-resistant Staphylococcus aureus isolates collected from the University Clinical Center in Gdańsk between 2008 and 2009 were investigated. Phage typing was used as the initial screening in the study. The basic set of phages and the additional set of phages were used. Most of the isolates (56 %) belonged to the phage group III. With the additional set of phages, eight types were found, with predominant one MR8 (50 %). Sixteen distinct spa types were observed. The most frequent were t003 (22 %), t151 (16 %), and t008 (12 %). The spa types were clustered into two spa-CC and eight singletons. The predominant CC010 (50 %) consisted of six types, with the most common t003 (36.7 %) and t151(26.7 %), and in 80 % was identified as staphylococcal chromosomal casette mec (SCCmec) type II. The second cluster has no founder (12 %) with only two spa types: t037 belonging to SCCmec type III and t029. In the most frequent singleton, spa type t008 alone was clustered in 12 % of the isolates. All singletons correspond to SCCmec type IV. The CC010 was distributed in most of the hospital wards, corresponded to Multilocus sequence typing type ST5/ST225 and was constantly present throughout the observed period. The isolates of CC010 generally belonged to the phage group III, and most of them (53.3 %) were resistant to erythromycin, clindamycin, and ciprofloxacin. The concordance between spa-clone and phage type was very high, but the same phage type MR8 was observed within different spa types of the predominant clone.
机译:调查了2008年至2009年间从格但斯克大学临床中心收集的耐甲氧西林金黄色葡萄球菌临床分离株中水疗类型和水疗克隆复合体(CC)的出现。噬菌体分型被用作研究的初始筛选。使用了基本的噬菌体组和另外的噬菌体组。大多数分离株(56%)属于噬菌体组III。在另一组噬菌体中,发现了八种类型,主要是一种MR8(50%)。观察到十六种不同的水疗中心类型。最频繁的是t003(22%),t151(16%)和t008(12%)。水疗中心类型分为两个spa-CC和八个单例。占主导地位的CC010(50%)由六种类型组成,最常见的是t003(36.7%)和t151(26.7%),其中80%被确定为II型葡萄球菌染色体胶束(SCCmec)。第二个集群没有创建者(12%),只有两个spa类型:属于SCCmec III型的t037和t029。在最常见的单例中,仅温泉类型t008聚集在12%的分离物中。所有单例对应于IV型SCCmec。 CC010分布在医院的大多数病房中,对应于Multilocus序列类型类型ST5 / ST225,并且在整个观察期内一直存在。 CC010的分离物通常属于噬菌体组III,其中大多数(53.3%)对红霉素,克林霉素和环丙沙星有抗性。 spa克隆与噬菌体类型之间的一致性很高,但是在主要克隆的不同spa类型中观察到相同的噬菌体类型MR8。

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